Toggle navigation sidebar

Toggle in-page Table of Contents

BGS course book

Welcome to Bacterial Genome Sequencing

Course Details

BGS course manual
Facilities and Equipment for the Course
Assessments

Week A microbiology

Week A Microbiology

Week B sequencing

Week B manual
ONT ligation library preparation

Week C assembly

Week C manual
Introduction to the unix command line
sequence_QC.ipynb
taxonomic_ID.ipynb
assembly.ipynb

Week D annotation

Week D manual
AMR_detection.ipynb

Week E antibiotics

Week E: Student-led experiments

Completing the course

final tasks

Powered by Jupyter Book

repository
open issue

Index

By Dave Lunt et al
© Copyright 2022.